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Alternative Splicing Gallery

Detail view for swissprot protein PPT2_BOVIN and isoform Q1JQA0-2

Template: 1pja
Sequence Identity (Template - Swissprot): 0.96268654
Coverage of swissprot protein: 0.8786885

Alignment

PPT2_BOVIN	MLGLPERRLPSAEFLLLLPFLLLLLLLLPAAPAPHRAAYKPVIVVHGLFDSSYSFRHLLEYINETHPGTAVTVLDLFDGRESLRPLWEQVQGFREAVAPI
1pja		-------------------------------------SYKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWEQVQGFREAVVPI
SSE		-------------------------------------CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHCCHHHHHHHHHHHHHHH
VARSPLIC	                                                                                                    

PPT2_BOVIN	MAKALQGVHLICYSQGGLVCRALLSVMDEHNVDSFISLSSPQMGQYGDTNYLKWLFPTSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLAL
1pja		MAKAPQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLAL
SSE		HHHCCCCEEEEEECHHHHHHHHHHHHCCCCCEEEEEEECCCCCCECCCCHHHHHHCCCCCHHHHHHHHCCCCHHHCCHHHHECCCCCHHHHHHHCCCHHH
VARSPLIC	                                                                       RRRRRRRRRRRRDDDDDDDDDDDDDDDDD

PPT2_BOVIN	INGERDHPNATAWRKNFLRLGRLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEKQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCI
1pja		INGERDHPNATVWRKNFLRVGHLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCI
SSE		HCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHCCEECCCCCEECHHHCHHHHCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHC
VARSPLIC	DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

PPT2_BOVIN	EPWLS
1pja		EPWLS
SSE		HHHCC
VARSPLIC	DDDDD

Varsplic events:
VSP_020000 REPLACE 172-183 WGQEFSICNYWH => VGPGILHLQLLA, affected aminoacids in template: 134-145 Color: Green
VSP_020001 REMOVE 184-305, affected aminoacids in template: 146-267 Color: Red

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