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Alternative Splicing Gallery

Detail view for swissprot protein PPT2_RAT and isoform O70489-2

Template: 1pja
Sequence Identity (Template - Swissprot): 0.9589552
Coverage of swissprot protein: 0.8874172

Alignment

PPT2_RAT	MPGLWRQRLPSAWALLLLPFLPLLLPAAPAPHRGSYKPVIVVHGLFDSSYSFRHLLDYINETHPGTVVTVLDLFDGRESLRPLWEQVQGFREAVVPIMEK
1pja		----------------------------------SYKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWEQVQGFREAVVPIMAK
SSE		----------------------------------CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHH
VARSPLIC	                                                                                                    

PPT2_RAT	APEGVHLICYSQGGLVCRALLSVMDEHNVDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLALING
1pja		APQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLALING
SSE		CCCCEEEEEECHHHHHHHHHHHHCCCCCEEEEEEECCCCCCECCCCHHHHHHCCCCCHHHHHHHHCCCCHHHCCHHHHECCCCCHHHHHHHCCCHHHHCC
VARSPLIC	                                                      RRRRDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

PPT2_RAT	ERDHPNATAWRKNFLRVGRLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQPVYLRDSFGLKTLLARGAIVRCPMAGVSHTTWHSNRTLYDACIEPW
1pja		ERDHPNATVWRKNFLRVGHLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAGISHTAWHSNRTLYETCIEPW
SSE		CCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHCCEECCCCCEECHHHCHHHHCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHCHHH
VARSPLIC	DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

PPT2_RAT	LS
1pja		LS
SSE		CC
VARSPLIC	DD

Varsplic events:
VSP_005189 REPLACE 155-158 TSMR => FCHG, affected aminoacids in template: 120-123 Color: Green
VSP_005190 REMOVE 159-302, affected aminoacids in template: 124-267 Color: Red

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