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Alternative Splicing Gallery

Detail view for swissprot protein CP343_HUMAN and isoform Q9HB55-4

Template: 1w0f
Sequence Identity (Template - Swissprot): 0.7625272
Coverage of swissprot protein: 0.9125249

Alignment

CP343_HUMAN	MDLIPNFAMETWVLVATSLVLLYIYGTHSHKLFKKLGIPGPTPLPFLGTILFYLRGLWNFDRECNEKYGEMWGLYEGQQPMLVIMDPDMIKTVLVKECYS
1w0f		------------------------YGTHSHGLFKKLGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYS
SSE		------------------------CCCCHHHHHHHHCCCCCCCECCCECHHHHHCCHHHHHHHHHHHHCCEEEEEECCEEEEEECCHHHHHHHHCCCCCC
VARSPLIC	                                                                                                    

CP343_HUMAN	VFTNQMPLGPMGFLKSALSFAEDEEWKRIRTLLSPAFTSVKFKEMVPIISQCGDMLVRSLRQEAENSKSINLKDFFGAYTMDVITGTLFGVNLDSLNNPQ
1w0f		VFTNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQ
SSE		CCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
VARSPLIC	                                                                                                    

CP343_HUMAN	DPFLKNMKKLLKLDFLDPFLLLISLFPFLTPVFEALNIGLFPKDVTHFLKNSIERMKESRLKDKQKHRVDFFQQMIDSQNSKETKSHKALSDLELVAQSI
1w0f		DPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRL-------VDFLQLMIDSQN--------ALSDLELVAQSI
SSE		CCCHHHHCCCCCCCCCCHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC-------CCHHHHHHCCCC--------CCCCCCHHHHHH
VARSPLIC	                       RRRRRRRRRRRRRRRRRRRRRRRRRRRDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

CP343_HUMAN	IIIFAAYDTTSTTLPFIMYELATHPDVQQKLQEEIDAVLPNKAPVTYDALVQMEYLDMVVNETLRLFPVVSRVTRVCKKDIEINGVFIPKGLAVMVPIYA
1w0f		IFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYA
SSE		HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCECCCCCCECCCCEEEECHHH
VARSPLIC	DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

CP343_HUMAN	LHHDPKYWTEPEKFCPERFSKKNKDSIDLYRYIPFGAGPRNCIGMRFALTNIKLAVIRALQNFSFKPCKETQIPLKLDNLPILQPEKPIVLKVHLRDGIT
1w0f		LHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKVESRDG--
SSE		HHCCCCCCCCCCCCCHHHHCCCCCCCCCECCECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC--
VARSPLIC	DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  

CP343_HUMAN	SGP
1w0f		---
SSE		---
VARSPLIC

Varsplic events:
VSP_000612 REPLACE 224-250 SLFPFLTPVFEALNIGLFPKDVTHFLK => YRVSLCCLGRSAWCDLGSLKPPPPGFE, affected aminoacids in template: 199-225 Color: Green
VSP_000613 REMOVE 251-503, affected aminoacids in template: 226-458 Color: Red

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