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Alternative Splicing Gallery

Detail view for swissprot protein PTN11_HUMAN and isoform Q06124-3

Template: 2shp
Sequence Identity (Template - Swissprot): 0.99185336
Coverage of swissprot protein: 0.8224456

Alignment

PTN11_HUMAN	MTSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKY
2shp		-KSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKY
SSE		-CCCCCECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCEEEEEEEECCCCCEEECCCCEECCHHHHHHHHHCCCCCCECCCCCECCCCE
VARSPLIC	                                                                                                    

PTN11_HUMAN	PLNCADPTSERWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQELKYDVGGGERFDSLTDLVEHYKKN
2shp		PLNCADPTSERWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDN-----DGKSKVTHVMIRCQELKYDVGGGERFDSLTDLVEHYKKN
SSE		ECCCCCCCCCCCECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEECCC-----CCCCEEEEEEEEEECCEEECCCCCCECCHHHHHHHHHHC
VARSPLIC	                                                                                                    

PTN11_HUMAN	PMVETLGTVLQLKQPLNTTRINAAEIESRVRELSKLAETTDKVKQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEP
2shp		PMVETLGTVLQLKQPLNTTRINAAEIESRVRELSK----------GFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHD------
SSE		CCECCCCCECCCCEECCCCCEEHHHHHHHHHHHHC----------CHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHCCCCCCCCCCCCEEECCC------
VARSPLIC	                                                                                                    

PTN11_HUMAN	VSDYINANIIMPEFETKCNNSKPKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRE
2shp		-SDYINANIIMP-----------KKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRE
SSE		-CCEEEEEEECC-----------CCCEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCCEECCEECCCCCCCCCCCEEEECCEEEEEEEEEECCCEEEEE
VARSPLIC	                                                                                                    

PTN11_HUMAN	LKLSKVGQALLQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQM
2shp		LKLSKVGQ----GNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQM
SSE		EEEEECCE----EEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHH
VARSPLIC	       D                                                       RDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

PTN11_HUMAN	VRSQRSGMVQTEAQYRFIYMAVQHYIETLQRRIEEEQKSKRKGHEYTNIKYSLADQTSGDQSPLPPCTPTPPCAEMREDSARVYENVGLMQQQKSFR
2shp		VRSQRSGMVQTEAQYRSIYMAVQHYIETL--------------------------------------------------------------------
SSE		HHCCCCCCCCCHHHHHHHHHHHHHHHHCC--------------------------------------------------------------------
VARSPLIC	DDDDDDDDDDDDDDDDDDDDDDDDDDDDD

Varsplic events:
VSP_016673 REPLACE 464-464 S => R, affected aminoacids in template: 425-425 Color: Green
VSP_016672 REMOVE 408-411, affected aminoacids in template: 373-373 Color: Red
VSP_016674 REMOVE 465-597, affected aminoacids in template: 426-490 Color: Red

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