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Alternative Splicing Gallery

Detail view for swissprot protein VHL_HUMAN and isoform P40337-2

Template: 1lqb
Sequence Identity (Template - Swissprot): 0.7605634
Coverage of swissprot protein: 1.0

Alignment

VHL_HUMAN	----------------------------------------------------------------------------------------------------
1lqb		MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGECGFTSQTARPQAPATVGLAFRADDTFEALCIEPFSSPPELP
SSE		CEEEEEEEEECEEEEEEEECCCEHHHHHHHHHHHHCCCHHHEEEEECCEECCCCCECCCCCCCCCCCECCECEEEEEEECCCCCCCCCCECCCCCCCCCC
VARSPLIC	                                                                                                    

VHL_HUMAN	-----------------MPRRAENWDEAEV-----GAEEAGVEEYGPE---------EDGGEESGAEESGPEESGPEELGAEEEMEAGRPR-PVLRSVNS
1lqb		DVMKMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDCPVLRSVNS
SSE		HHHCCEEEEECCCCCEEEEEHHHHCCCHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
VARSPLIC	                                                                                                    

VHL_HUMAN	REPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRS
1lqb		REPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRS
SSE		CCEEEEEEEECCCCCEEEEEECCCCCEEECCCECCCEEEEEEEECCCEEEEEECCCCCECEECCECCECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
VARSPLIC	                                              DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD              

VHL_HUMAN	LVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERIAHQR-------MGD-------
1lqb		LVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERIAHQREMLAYIPMDDDFQLRSF
SSE		HCCHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCECCCCCCEECCCC
VARSPLIC

Varsplic events:
VSP_004488 REMOVE 115-154, affected aminoacids in template: 246-285 Color: Red

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